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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015925201.1_cds_XP_016473470.1_65595
CDS Infomation

[gene=LOC107795362] [db_xref=GeneID:107795362] [protein=protein SHOOT GRAVITROPISM 5-like] [protein_id=XP_016473470.1] [location=complement(join(52381..53146,54018..54417,54597..54699))] [gbkey=CDS]
Sequence

ATGTTAAGCATTAATAACCCAAATTCCTCTTCCGACCCTTTCACTTCCTCAGAGAATGGA
AATAATTGTGATAGAAGAAAAAGAAGGCCAGCAGGAACCCCAGATCCAGATGCAGAAGTG
GTATCCCTATCACCAAAAACGTTATTGGAATCAGATCAATACGTATGTGAGATCTGTAAC
CAAGGATTTCAAAGGGACCAAAATTTACAGATGCATAGGAGAAGGCATAAAGTACCATGG
AAATTGCTCAAAAGAGAAACCCCAATAGTTCGAAAGAGAGTTTTTGTGTGTCCAGAACCA
ACTTGTCTACATCATGACCCTTGTCATGCTCTTGGTGATCTTGTTGGTATTAAGAAACAC
TTCAGAAGGAAACATAGTAATCACAAGCAATGGATTTGTGACAAATGCTCCAAAGGCTAT
GCAGTTCAGTCCGATTACAAAGCACATCTCAAAACCTGTGGCACTCGTGGCCATTCTTGC
GATTGTGGCCGCGTCTTCTCAAGGGTGGAGAGCTTCATAGAGCACCAAGATGCCTGTAGC
TTCAGCAGACTCCGATCAGATTCAAAATTTTTACAGCCAACAGCTTGCCTTTCTCGGACA
GCTTCTAGTCCCACCCCCTCAAGTGACACTAATCTCACTACAGTTCCATGGCCTAGTTTC
CTTATATCCAATAAGCCAAAAACTTTGACTAGTTCCAAAATATTTCTCAAGAATGACGTA
AAGCAACACAATTTGGAGCTCCAGCTCTTGACTACTACTACTACTACATCTTCATCTAGC
CCCTTTGATGTCTCTGTATCATCTAAACCGAACGATGGTCACTCCACTCATCTTCAACTC
TCCATTGGTTCATCCGATTTCAATGAGAAAAATGACTCAGAAAATGACACGCACAAATCG
AGAAATATTCCAAATTTGGATGCTGCATTGACGCTTAAAGACGAAGCGCGAGAGCGGTTG
AGGCAGGCCACGGCTGAAAAGGCATATGCCGAAGAAACAAGAAAGCAAGCCAAGAGACAA
ATTGAATTGGCCGAGCAAGAATTCGCCAATGCCAAGAGGATTAGACGACAAGCACAAGGG
GAATTAGAAAAGGCTCAAGCTTTGAAGGAGCAAGCAATCAGGCAAATTAATTCTACTCTT
TCACAAATCACTTGTCATGCTTGCAAACAGCAGTTCCAAACTAAAAGTATAGCAACAACA
AGTATAGTTCCTTCTTATGATATGGGGTTGAGCCACATTTCTTCAGGTTTAACAGAACAC
GAGATGTAA

Peptide Sequence

PEP ID

XP_016473470.1
PEP Infomation

PREDICTED: protein SHOOT GRAVITROPISM 5-like [Nicotiana tabacum]
Sequence

MLSINNPNSSSDPFTSSENGNNCDRRKRRPAGTPDPDAEVVSLSPKTLLESDQYVCEICN
QGFQRDQNLQMHRRRHKVPWKLLKRETPIVRKRVFVCPEPTCLHHDPCHALGDLVGIKKH
FRRKHSNHKQWICDKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACS
FSRLRSDSKFLQPTACLSRTASSPTPSSDTNLTTVPWPSFLISNKPKTLTSSKIFLKNDV
KQHNLELQLLTTTTTTSSSSPFDVSVSSKPNDGHSTHLQLSIGSSDFNEKNDSENDTHKS
RNIPNLDAALTLKDEARERLRQATAEKAYAEETRKQAKRQIELAEQEFANAKRIRRQAQG
ELEKAQALKEQAIRQINSTLSQITCHACKQQFQTKSIATTSIVPSYDMGLSHISSGLTEH
EM

Transcript Sequence

Gene sequence data has not been registered.